Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | A6122_RS00440 | Not Available | Positive | 92023 - 92787 | 25911.3 |
| hypothetical protein | A6122_RS00445 | Not Available | Positive | 93075 - 93839 | 28544.7 |
| imma/irre family metallo-endopeptidase | A6122_RS00450 | Not Available | Positive | 93839 - 95239 | 51843.2 |
| dcl family protein | A6122_RS00455 | Not Available | Negative | 95372 - 96061 | 26091.4 |
| hypothetical protein | A6122_RS00460 | Not Available | Negative | 96116 - 96388 | 9987.89 |
| hypothetical protein | A6122_RS00465 | Not Available | Negative | 96373 - 97047 | 24778.9 |
| hypothetical protein | A6122_RS00470 | Not Available | Negative | 97243 - 97881 | 23570.8 |
| hypothetical protein | A6122_RS16235 | Not Available | Negative | 98269 - 99078 | 29928.5 |
| hypothetical protein | A6122_RS16240 | Not Available | Negative | 99083 - 100231 | 42954.0 |
| isl3 family transposase | A6122_RS00490 | Not Available | Negative | 100271 - 101581 | 48672.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
