Salipiger abyssi strain JLT2014

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Salipiger

Description

Salipiger abyssi strain JLT2014 is a Gram-negative, rod-shaped bacterium. This organism is notable for having a total of eight replicons, which may reflect its adaptability and genetic diversity. The strain is cataloged under several accessions, including NZ_CP015090.1, NZ_CP015091.1, NZ_CP015092.1, NZ_CP015093.1, NZ_CP015094.1, NZ_CP015096.1, NZ_CP015097.1, and NZ_CP015095.1. These accessions provide a comprehensive genetic framework for further research and characterization of the strain. The presence of multiple replicons in Salipiger abyssi strain JLT2014 could suggest a complex evolutionary history and may play a role in its metabolic versatility. This characteristic is often associated with the ability of bacteria to thrive in diverse environments, which aligns with the ecological niches typically occupied by members of the Salipiger genus. Understanding the genetic structure and traits of Salipiger abyssi strain JLT2014 can provide insights into its role within marine ecosystems, particularly in relation to nutrient cycling and interactions with other microbial communities. The ecological implications of its adaptability and genetic complexity may offer valuable perspectives on microbial life in extreme environments, such as deep-sea habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusSalipiger
SpeciesSalipiger abyssi
Strainstrain JLT2014

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salipiger abyssi strain JLT2014


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family nad(p)-dependent oxidoreductaseGa0080574_RS00680Not AvailableNegative1309 - 206426164.8
aminotransferase class ivGa0080574_RS00685Not AvailableNegative2061 - 299034062.8
histone deacetylase family proteinGa0080574_RS00690Not AvailableNegative3014 - 403937040.4
rida family proteinGa0080574_RS26135Not AvailablePositive4568 - 496314034.7
amidaseGa0080574_RS00700Not AvailablePositive4960 - 637849701.4
shikimate dehydrogenase family proteinGa0080574_RS00705Not AvailablePositive6382 - 718527375.2
thiamine pyrophosphate-dependent enzymeGa0080574_RS00710Not AvailablePositive7279 - 947178900.0
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferaseGa0080574_RS00715Not AvailablePositive9483 - 1072142904.5
hypothetical proteinGa0080574_RS25725Not AvailablePositive10764 - 110068636.44
isochorismatase family cysteine hydrolaseGa0080574_RS00720Not AvailableNegative11222 - 1190825168.0

Displaying genes 1 – 10 of 5022 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.