Lactobacillus oris strain J-1

Rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Limosilactobacillus

Description

Lactobacillus oris strain J-1 is a rod-shaped bacterium that thrives in the anaerobic environment of the oral cavity. This strain is of particular interest due to its specific habitat and its role in the microbiome of Gallus gallus, commonly known as the domestic chicken. The strain possesses true flagella, which may contribute to its motility and ability to colonize its niche within the oral cavity. Lactobacillus oris strain J-1 is characterized by having two replicons, indicating a certain level of genomic complexity which may be relevant for its adaptability and function within its ecological niche. The presence of Lactobacillus oris in the oral cavity of chickens suggests a potential role in oral health and digestion, as lactobacilli are often associated with beneficial functions, such as fermentation and microbial balance. The accessions NZ_CP014788.1 and NZ_CP014789.1 provide further genetic information that can be utilized for studies exploring the genetic makeup and potential applications of this strain in both microbiology and poultry health. Overall, the ecological insight from the presence of Lactobacillus oris strain J-1 in the oral cavity of Gallus gallus underscores the importance of anaerobic bacteria in maintaining the microbial diversity and health of their hosts, contributing to a balanced oral microbiome.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLimosilactobacillus
SpeciesLimosilactobacillus oris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatoral cavity
Biotic relationshipNot Available
Host(s)Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactobacillus oris strain J-1


Gene Summary

Adenine Count

12758 bp

Thymine Count

13078 bp

Guanine Count

11964 bp

Cytosine Count

13391 bp

Genome Length

51191 bp

Protein-coding Genes

51 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system pemk/mazf family toxinAYI71_RS15715P96622Negative36 - 40113463.4
alanine racemaseAYI71_RS15720A5VI51Negative417 - 154141621.8
d-alanine--poly(phosphoribitol) ligase subunit dltaAYI71_RS15725B8ZQ14Positive1886 - 347558329.4
d-alanyl-lipoteichoic acid biosynthesis protein dltbAYI71_RS15730Q5M4V4Positive3475 - 469248109.4
d-alanine--poly(phosphoribitol) ligase subunit dltcAYI71_RS15735Q1G852Positive4722 - 49618760.2
d-alanyl-lipoteichoic acid biosynthesis protein dltdAYI71_RS15740P55154Positive4954 - 624349661.5
dead/deah box helicaseAYI71_RS15745Q9Z6C9Negative6565 - 806156317.2
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseAYI71_RS15750Q2FWH4Negative8128 - 950750536.3
zinc metalloprotease htpxAYI71_RS15755A5VI38Negative9653 - 1054932528.6
lema family proteinAYI71_RS15760A8AVK0Negative10560 - 1112020855.1

Displaying genes 1 – 10 of 61 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

8 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003334aldehydo-D-ribose 5-phosphateC5H11O8PChemical structure of aldehydo-D-ribose 5-phosphateNot available
Average230.1098Da
Monoisotopic230.0191538Da
BASm0003432di-trans,octa-cis-undecaprenyl diphosphateC55H89O7P2Chemical structure of di-trans,octa-cis-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.609999942Da
BASm0004926UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-L-lysyl-D-alanyl-D-alanineC40H62N9O26P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-L-lysyl-D-alanyl-D-alanineNot available
Average1146.922Da
Monoisotopic1146.329767888Da
BASm0007002UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-L-lysineC34H52N7O24P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-L-lysineNot available
Average1004.764Da
Monoisotopic1004.25554Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da
BASm0014079FuranC4H4OChemical structure of Furan110-00-9
Average68.074Da
Monoisotopic68.02621475Da
BASm0034631TG(18:4(6Z,9Z,12Z,15Z)/18:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z))C59H94O6Chemical structure of TG(18:4(6Z,9Z,12Z,15Z)/18:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z))NULL
Average899.395Da
Monoisotopic898.705040747Da

Displaying 1–8 of 8 metabolites

Health Effects

No health effects information available for this bacterium.