Lactobacillus oris strain J-1

Rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Limosilactobacillus

Description

Lactobacillus oris strain J-1 is a rod-shaped bacterium that thrives in the anaerobic environment of the oral cavity. This strain is of particular interest due to its specific habitat and its role in the microbiome of Gallus gallus, commonly known as the domestic chicken. The strain possesses true flagella, which may contribute to its motility and ability to colonize its niche within the oral cavity. Lactobacillus oris strain J-1 is characterized by having two replicons, indicating a certain level of genomic complexity which may be relevant for its adaptability and function within its ecological niche. The presence of Lactobacillus oris in the oral cavity of chickens suggests a potential role in oral health and digestion, as lactobacilli are often associated with beneficial functions, such as fermentation and microbial balance. The accessions NZ_CP014788.1 and NZ_CP014789.1 provide further genetic information that can be utilized for studies exploring the genetic makeup and potential applications of this strain in both microbiology and poultry health. Overall, the ecological insight from the presence of Lactobacillus oris strain J-1 in the oral cavity of Gallus gallus underscores the importance of anaerobic bacteria in maintaining the microbial diversity and health of their hosts, contributing to a balanced oral microbiome.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLimosilactobacillus
SpeciesLimosilactobacillus oris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatoral cavity
Biotic relationshipNot Available
Host(s)Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactobacillus oris strain J-1 plasmid unnamed1, complete sequence.

Gene Summary

Adenine Count

12758 bp

Thymine Count

13078 bp

Guanine Count

11964 bp

Cytosine Count

13391 bp

Genome Length

51191 bp

Protein-coding Genes

51 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
f0f1 atp synthase subunit gammaAYI71_RS15815A5VIR0Negative19555 - 2050234763.4
f0f1 atp synthase subunit alphaAYI71_RS15820A5VIQ9Negative20540 - 2207255365.0
atp synthase f1 subunit deltaAYI71_RS15825A5VIQ8Negative22105 - 2264720476.5
f0f1 atp synthase subunit bAYI71_RS15830A5VIQ7Negative22637 - 2315519181.7
f0f1 atp synthase subunit cAYI71_RS15835B2GAU0Negative23202 - 234207188.19
f0f1 atp synthase subunit aAYI71_RS15840A5VIQ5Negative23445 - 2415226058.3
yibe/f family proteinAYI71_RS15845Not AvailableNegative24566 - 2532427335.4
yibe/f family proteinAYI71_RS15850Not AvailableNegative25321 - 2643641016.0
uracil phosphoribosyltransferaseAYI71_RS15855A5VIQ0Negative26556 - 2719123288.8
l-threonylcarbamoyladenylate synthaseAYI71_RS15860P39153Negative27284 - 2831236568.9

Displaying genes 21 – 30 of 61 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

8 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003334aldehydo-D-ribose 5-phosphateC5H11O8PChemical structure of aldehydo-D-ribose 5-phosphateNot available
Average230.1098Da
Monoisotopic230.0191538Da
BASm0003432di-trans,octa-cis-undecaprenyl diphosphateC55H89O7P2Chemical structure of di-trans,octa-cis-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.609999942Da
BASm0004926UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-L-lysyl-D-alanyl-D-alanineC40H62N9O26P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-L-lysyl-D-alanyl-D-alanineNot available
Average1146.922Da
Monoisotopic1146.329767888Da
BASm0007002UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-L-lysineC34H52N7O24P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-L-lysineNot available
Average1004.764Da
Monoisotopic1004.25554Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da
BASm0014079FuranC4H4OChemical structure of Furan110-00-9
Average68.074Da
Monoisotopic68.02621475Da
BASm0034631TG(18:4(6Z,9Z,12Z,15Z)/18:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z))C59H94O6Chemical structure of TG(18:4(6Z,9Z,12Z,15Z)/18:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z))NULL
Average899.395Da
Monoisotopic898.705040747Da

Displaying 1–8 of 8 metabolites

Health Effects

No health effects information available for this bacterium.