Flavobacterium covae strain 94-081

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium covae strain 94-081 is characterized as a rod-shaped bacterium that possesses flagella, indicating its potential for motility. This strain is notable for having a single replicon, which is significant for its genetic organization and replication processes. The genome of Flavobacterium covae strain 94-081 is documented under the accession number NZ_CP013992.1, allowing for further study and reference in microbial research. The presence of flagella suggests that Flavobacterium covae may exhibit active movement in its environment, which can be advantageous for colonization and nutrient acquisition. Rod-shaped bacteria, including those in the Flavobacterium genus, are often involved in various ecological processes, particularly in aquatic ecosystems where they can play roles in the decomposition of organic matter and nutrient cycling. Overall, the traits of Flavobacterium covae strain 94-081 underscore its potential ecological importance, particularly in environments where motility and efficient nutrient utilization are critical for survival and interaction with other microbial communities. The insights gathered from studying this strain can contribute to a better understanding of microbial dynamics in its natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium covae
Strainstrain 94-081

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium covae strain 94-081
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium covae strain 94-081 chromosome, complete genome.

Gene Summary

Adenine Count

1144787 bp

Thymine Count

1153677 bp

Guanine Count

503735 bp

Cytosine Count

519401 bp

Genome Length

3321600 bp

Protein-coding Genes

2784 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfite exporter taue/safe family proteinAWN65_RS06800Not AvailableNegative1519509 - 152021025723.3
fixh family proteinAWN65_RS06805Not AvailableNegative1520247 - 152069317373.1
cytochrome c oxidase accessory protein ccogAWN65_RS06810P54932Negative1520796 - 152221754003.6
cbb3-type cytochrome c oxidase n-terminal domain-containing proteinAWN65_RS06815A6ULU4Negative1522313 - 152324834890.2
cytochrome c oxidase subunit ivAWN65_RS06820Not AvailableNegative1523407 - 15236017660.51
cytochrome-c oxidase, cbb3-type subunit iAWN65_RS06825D9IA43Negative1523608 - 152579483394.1
cbb3-type cytochrome oxidase assembly protein ccosAWN65_RS06830Not AvailableNegative1525797 - 15259857188.91
heavy metal translocating p-type atpase metal-binding domain-containing proteinAWN65_RS06835P18398Negative1526109 - 152849090752.2
crp/fnr family transcriptional regulatorAWN65_RS06840Not AvailablePositive1528597 - 152927725342.0
hypothetical proteinAWN65_RS14560Not AvailablePositive1529674 - 15298235569.84

Displaying genes 1361 – 1370 of 2890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

162 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 162 metabolites

Health Effects

No health effects information available for this bacterium.