Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is4 family transposase | AT705_RS25650 | Not Available | Negative | 1059839 - 1059954 | 4203.45 |
| abc transporter substrate-binding protein | AT705_RS04715 | Not Available | Positive | 1060130 - 1060858 | 27285.7 |
| hypothetical protein | AT705_RS04720 | Not Available | Negative | 1061468 - 1061758 | 11249.0 |
| hypothetical protein | AT705_RS25160 | Not Available | Negative | 1061871 - 1062062 | 7116.76 |
| hypothetical protein | AT705_RS04725 | Not Available | Positive | 1062154 - 1063035 | 33630.4 |
| zinc-binding dehydrogenase | AT705_RS04730 | Not Available | Negative | 1063159 - 1064166 | 36265.7 |
| efflux rnd transporter permease subunit | AT705_RS04735 | Not Available | Negative | 1064323 - 1067499 | 114477.0 |
| efflux rnd transporter periplasmic adaptor subunit | AT705_RS04740 | Q8G2M7 | Negative | 1067509 - 1068672 | 41801.0 |
| lysr family transcriptional regulator | AT705_RS04745 | Not Available | Positive | 1068802 - 1069755 | 36084.3 |
| bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | AT705_RS04750 | P08331 | Positive | 1070133 - 1072250 | 77242.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
