Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoaspartyl peptidase/l-asparaginase family protein | AT705_RS04665 | Q7CQV5 | Negative | 1044527 - 1045573 | 37212.1 |
| sapc family protein | AT705_RS04670 | Not Available | Negative | 1045697 - 1046407 | 26626.6 |
| tryptophan halogenase family protein | AT705_RS04675 | Not Available | Negative | 1046494 - 1048035 | 57687.8 |
| tonb-dependent receptor | AT705_RS04680 | Not Available | Negative | 1048179 - 1050878 | 98834.3 |
| molecular chaperone htpg | AT705_RS04685 | Q3IKQ2 | Negative | 1051635 - 1053551 | 72623.5 |
| recombination mediator recr | AT705_RS04690 | Q3IKN2 | Negative | 1053722 - 1054321 | 21353.8 |
| phospholipid-binding protein mlac | AT705_RS04695 | P45028 | Negative | 1054606 - 1055217 | 22793.8 |
| acyloxyacyl hydrolase | AT705_RS04700 | Q7WD07 | Positive | 1055453 - 1055977 | 19711.3 |
| tonb-dependent siderophore receptor | AT705_RS04705 | Not Available | Positive | 1056286 - 1058649 | 88181.5 |
| is5 family transposase | AT705_RS04710 | Not Available | Positive | 1058879 - 1059793 | 34238.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
