Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtmp kinase | AT705_RS04615 | Q2SK46 | Negative | 1033168 - 1033821 | 23807.5 |
| duf6765 family protein | AT705_RS04620 | Not Available | Positive | 1033970 - 1035031 | 39358.4 |
| cupin domain-containing protein | AT705_RS04625 | Not Available | Negative | 1035076 - 1035507 | 15763.9 |
| hypothetical protein | AT705_RS04630 | Not Available | Negative | 1035556 - 1036428 | 33142.4 |
| response regulator | AT705_RS04635 | P69229 | Negative | 1036433 - 1037107 | 25367.7 |
| atp-binding protein | AT705_RS04640 | P30847 | Negative | 1037181 - 1038791 | 60572.9 |
| pilz domain-containing protein | AT705_RS04645 | Not Available | Negative | 1039136 - 1039429 | 10746.0 |
| two-component system response regulator | AT705_RS04650 | Q9A5I5 | Negative | 1039472 - 1039849 | 13866.7 |
| atp-dependent rna helicase hrpa | AT705_RS04655 | P43329 | Negative | 1039958 - 1043842 | 145951.0 |
| cbs domain-containing protein | AT705_RS04660 | Not Available | Negative | 1044007 - 1044435 | 15902.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
