Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| act domain-containing protein | AT705_RS04515 | Not Available | Positive | 1010759 - 1011139 | 13798.6 |
| pts glucose transporter subunit iia | AT705_RS04520 | Not Available | Positive | 1011139 - 1011645 | 18292.6 |
| arsc family reductase | AT705_RS04525 | P24178 | Positive | 1011642 - 1011992 | 13261.8 |
| succinyl-diaminopimelate desuccinylase | AT705_RS04530 | Q3IL20 | Positive | 1011989 - 1013128 | 41124.6 |
| m15 family metallopeptidase | AT705_RS04535 | P43941 | Positive | 1013125 - 1013805 | 25224.9 |
| pyridoxal phosphate-dependent aminotransferase | AT705_RS04540 | P0A960 | Negative | 1013825 - 1015042 | 45486.2 |
| hpt domain-containing protein | AT705_RS04545 | Not Available | Negative | 1015242 - 1015586 | 12482.8 |
| pp_00884 | AT705_RS04550 | Not Available | Positive | 1015716 - 1016324 | Not Available |
| clca_x family protein | AT705_RS04555 | Not Available | Positive | 1016314 - 1017117 | 29762.2 |
| bifunctional diguanylate cyclase/phosphodiesterase | AT705_RS04560 | Not Available | Negative | 1017068 - 1019578 | 93414.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
