Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AT705_RS04465 | Not Available | Positive | 997023 - 999800 | 105469.0 |
| duf4136 domain-containing protein | AT705_RS04470 | Not Available | Positive | 999906 - 1000487 | 22178.4 |
| tonb-dependent siderophore receptor | AT705_RS04475 | Not Available | Negative | 1000558 - 1003224 | 97489.2 |
| hypothetical protein | AT705_RS04480 | Not Available | Negative | 1003451 - 1003885 | 15318.4 |
| exodeoxyribonuclease iii | AT705_RS04485 | P09030 | Positive | 1004204 - 1005013 | 30722.4 |
| energy-coupling factor abc transporter permease | AT705_RS04490 | Not Available | Positive | 1005019 - 1005645 | 23681.7 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | AT705_RS04495 | P36999 | Positive | 1005642 - 1006460 | 30991.9 |
| terminus macrodomain insulation protein yfbv | AT705_RS04500 | Q9KT06 | Negative | 1006492 - 1006935 | 16981.0 |
| acetate/propionate family kinase | AT705_RS04505 | A1S5P6 | Positive | 1007262 - 1008461 | 42876.0 |
| phosphate acetyltransferase | AT705_RS04510 | Q9KT08 | Positive | 1008465 - 1010612 | 77456.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
