Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylglutaryl-coa lyase | AT705_RS04315 | Q9I2A0 | Positive | 955234 - 956142 | 32112.5 |
| coa transferase subunit a | AT705_RS04320 | P42315 | Positive | 956177 - 956875 | 25129.2 |
| coa transferase subunit b | AT705_RS04325 | P0C7I8 | Positive | 956886 - 957548 | 23245.3 |
| bcct family transporter | AT705_RS04330 | Q87NG3 | Positive | 957949 - 959526 | 56382.3 |
| 3'-5' exonuclease | AT705_RS04335 | Q9ZHF6 | Negative | 959632 - 960339 | 27096.5 |
| duf294 nucleotidyltransferase-like domain-containing protein | AT705_RS04340 | Not Available | Negative | 960339 - 962234 | 70883.9 |
| protease htpx | AT705_RS04345 | C4LDD1 | Positive | 962567 - 963427 | 31027.9 |
| duf2987 domain-containing protein | AT705_RS04350 | Not Available | Negative | 963518 - 964174 | 24649.5 |
| glucosaminidase domain-containing protein | AT705_RS04355 | Not Available | Negative | 964164 - 964988 | 31701.4 |
| anti-phage deoxyguanosine triphosphatase | AT705_RS04360 | A8FVT2 | Positive | 965291 - 966619 | 51182.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
