Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | AT705_RS04265 | Q58EB4 | Negative | 942800 - 943939 | 41587.1 |
| enoyl-coa hydratase | AT705_RS04270 | P52046 | Negative | 943939 - 944715 | 27611.2 |
| acyl-coa dehydrogenase family protein | AT705_RS04275 | Q9UKU7 | Negative | 944728 - 945885 | 41972.3 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | AT705_RS04280 | P28810 | Negative | 946018 - 947508 | 54256.8 |
| acetyl-coa c-acyltransferase | AT705_RS04285 | P45369 | Negative | 947577 - 948755 | 40286.4 |
| merr family dna-binding transcriptional regulator | AT705_RS04290 | Not Available | Positive | 949151 - 949543 | 15210.3 |
| isovaleryl-coa dehydrogenase | AT705_RS04295 | Q5RBD5 | Positive | 949694 - 950869 | 42869.4 |
| carboxyl transferase domain-containing protein | AT705_RS04300 | Q3ULD5 | Positive | 950879 - 952486 | 58159.7 |
| enoyl-coa hydratase/isomerase family protein | AT705_RS04305 | Q96DC8 | Positive | 952496 - 953278 | 27917.7 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | AT705_RS04310 | Q54KE6 | Positive | 953289 - 955232 | 70857.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
