Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | AT705_RS00130 | P0A358 | Negative | 28962 - 29171 | 7424.68 |
| dgtpase | AT705_RS00135 | A6T4W4 | Negative | 29450 - 30910 | 55351.5 |
| putative inorganic carbon transporter subunit daba | AT705_RS25610 | Q9KRQ4 | Positive | 31285 - 31458 | 6335.61 |
| hypothetical protein | AT705_RS25615 | Not Available | Positive | 31462 - 31641 | 6962.21 |
| hypothetical protein | AT705_RS00145 | Not Available | Positive | 31867 - 32088 | 7941.45 |
| hypothetical protein | AT705_RS00150 | Not Available | Positive | 32477 - 32839 | 12629.8 |
| glxa family transcriptional regulator | AT705_RS00155 | Q9HTH5 | Positive | 33541 - 34491 | 35480.4 |
| s41 family peptidase | AT705_RS00160 | Not Available | Positive | 34488 - 35762 | 47264.4 |
| type iii polyketide synthase | AT705_RS00165 | Not Available | Positive | 36236 - 37279 | 38174.9 |
| diguanylate cyclase domain-containing protein | AT705_RS00170 | P75908 | Positive | 37497 - 39428 | 73163.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
