Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01621 family pseudouridine synthase | AT705_RS04215 | P43930 | Negative | 933000 - 933665 | 24469.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | AT705_RS04220 | Q3IGX8 | Negative | 933652 - 934416 | 28252.9 |
| trm112 family protein | AT705_RS04225 | Q3IGX7 | Negative | 934404 - 934601 | 7420.96 |
| tetraacyldisaccharide 4'-kinase | AT705_RS04230 | Q3IGX6 | Negative | 934591 - 935574 | 36363.0 |
| lipid a export permease/atp-binding protein msba | AT705_RS04235 | Q3IGX5 | Negative | 935571 - 937313 | 64499.0 |
| dna internalization-related competence protein comec/rec2 | AT705_RS04240 | P51973 | Negative | 937377 - 939434 | 76509.3 |
| duf2062 domain-containing protein | AT705_RS04245 | Not Available | Positive | 939612 - 940127 | 19369.8 |
| is4 family transposase | AT705_RS04250 | O58499 | Negative | 940178 - 940822 | 22687.2 |
| sdr family oxidoreductase | AT705_RS04255 | Q9X248 | Negative | 941115 - 941876 | 27007.9 |
| 3-hydroxyisobutyrate dehydrogenase | AT705_RS04260 | P28811 | Negative | 941898 - 942788 | 30725.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
