Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | AT705_RS04165 | P0AFG7 | Negative | 921106 - 922590 | 52520.9 |
| 2-oxoglutarate dehydrogenase e1 component | AT705_RS04170 | P0AFG5 | Negative | 922601 - 925414 | 105119.0 |
| succinate dehydrogenase iron-sulfur subunit | AT705_RS04175 | Q8ZQU2 | Negative | 925498 - 926217 | 26754.3 |
| succinate dehydrogenase flavoprotein subunit | AT705_RS04180 | P0AC43 | Negative | 926228 - 928000 | 64763.4 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | AT705_RS04185 | P0AC45 | Negative | 928001 - 928348 | 12831.1 |
| succinate dehydrogenase, cytochrome b556 subunit | AT705_RS04190 | P63726 | Negative | 928339 - 928716 | 13932.2 |
| citrate synthase | AT705_RS04195 | P14165 | Positive | 929129 - 930415 | 47810.3 |
| aminotransferase class v-fold plp-dependent enzyme | AT705_RS04200 | Q9PDA6 | Positive | 930548 - 931771 | 44531.1 |
| sufe family protein | AT705_RS04205 | P0AGF3 | Positive | 931774 - 932181 | 15137.5 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | AT705_RS04210 | Q46927 | Negative | 932204 - 932998 | 28609.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
