Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integron integrase | AT705_RS04115 | Not Available | Positive | 907765 - 908724 | 36674.5 |
| hypothetical protein | AT705_RS04120 | Not Available | Positive | 908969 - 909319 | 12680.5 |
| hypothetical protein | AT705_RS04125 | Not Available | Negative | 909359 - 909655 | 11225.3 |
| protein kinase domain-containing protein | AT705_RS04130 | Not Available | Negative | 909748 - 911571 | 69262.5 |
| glutamine--trna ligase | AT705_RS04135 | Q3IGW8 | Negative | 911746 - 913407 | 63287.7 |
| duf3083 family protein | AT705_RS04140 | Not Available | Positive | 913661 - 914731 | 41608.3 |
| is110 family transposase | AT705_RS04145 | Q9HI37 | Positive | 914986 - 916029 | 39470.1 |
| hypothetical protein | AT705_RS04150 | Not Available | Negative | 916518 - 918455 | 71623.3 |
| succinate--coa ligase subunit alpha | AT705_RS04155 | Q51567 | Negative | 918881 - 919753 | 29882.2 |
| adp-forming succinate--coa ligase subunit beta | AT705_RS04160 | Q3IGW5 | Negative | 919753 - 920919 | 41383.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
