Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | AT705_RS04015 | A7B3K3 | Positive | 892726 - 893505 | 27722.7 |
| cupin domain-containing protein | AT705_RS04020 | Not Available | Positive | 893531 - 894193 | 24986.5 |
| hypothetical protein | AT705_RS04025 | Not Available | Negative | 894290 - 894709 | 15507.7 |
| hypothetical protein | AT705_RS04030 | Not Available | Negative | 894819 - 895181 | 13525.1 |
| is5 family transposase | AT705_RS04035 | Not Available | Negative | 895659 - 896573 | 34158.8 |
| is4 family transposase | AT705_RS04040 | Not Available | Positive | 896742 - 897958 | 44161.6 |
| duf1772 domain-containing protein | AT705_RS04045 | Not Available | Negative | 898080 - 898577 | 18351.0 |
| hypothetical protein | AT705_RS04050 | Not Available | Negative | 898698 - 899072 | 14689.4 |
| is4 family transposase | AT705_RS04055 | Not Available | Negative | 899113 - 900315 | 46656.1 |
| hypothetical protein | AT705_RS04060 | Not Available | Negative | 900512 - 901120 | 23351.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
