Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mipa/ompv family protein | AT705_RS03960 | Not Available | Negative | 884191 - 884934 | 27222.6 |
| hypothetical protein | AT705_RS03965 | Not Available | Negative | 885477 - 885740 | 9797.76 |
| hypothetical protein | AT705_RS03970 | Not Available | Negative | 885795 - 886241 | 16720.6 |
| hypothetical protein | AT705_RS03975 | Not Available | Negative | 886500 - 886808 | 11506.2 |
| duf6174 domain-containing protein | AT705_RS03980 | Not Available | Negative | 886893 - 887192 | 11463.7 |
| smp-30/gluconolactonase/lre family protein | AT705_RS03985 | P52430 | Negative | 887522 - 888595 | 38792.9 |
| is4 family transposase | AT705_RS03990 | Not Available | Positive | 889343 - 890259 | 33122.9 |
| alpha/beta hydrolase | AT705_RS04000 | Not Available | Negative | 890653 - 891453 | 29962.8 |
| is4 family transposase | AT705_RS25645 | Not Available | Positive | 891611 - 891747 | 5268.67 |
| helix-turn-helix domain-containing protein | AT705_RS04010 | Q93K57 | Negative | 892284 - 892625 | 13163.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
