Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-n-glycosidase f-related protein | AT705_RS03905 | Not Available | Positive | 872221 - 874053 | 69242.3 |
| hypothetical protein | AT705_RS03910 | Not Available | Negative | 874473 - 874904 | 16605.3 |
| hypothetical protein | AT705_RS03915 | Not Available | Negative | 875007 - 875252 | 9067.12 |
| hypothetical protein | AT705_RS03920 | Not Available | Negative | 875424 - 875918 | 18468.1 |
| hypothetical protein | AT705_RS03930 | Not Available | Positive | 876602 - 876781 | 6396.68 |
| duf6265 family protein | AT705_RS03935 | Not Available | Negative | 877209 - 877691 | 17742.1 |
| hamp domain-containing sensor histidine kinase | AT705_RS03940 | Q8GP19 | Negative | 878004 - 879365 | 50282.7 |
| response regulator transcription factor | AT705_RS03945 | P30843 | Negative | 879362 - 880027 | 23924.1 |
| efflux rnd transporter permease subunit | AT705_RS03950 | P25197 | Negative | 880068 - 883130 | 110650.0 |
| efflux rnd transporter periplasmic adaptor subunit | AT705_RS03955 | Not Available | Negative | 883134 - 884201 | 39380.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
