Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxidase, fmp-type | AT705_RS03850 | Not Available | Positive | 859975 - 861276 | 49314.7 |
| hypothetical protein | AT705_RS03855 | Not Available | Negative | 861355 - 861702 | 12623.8 |
| hypothetical protein | AT705_RS03860 | Not Available | Negative | 861768 - 862760 | 37690.1 |
| hypothetical protein | AT705_RS03865 | Not Available | Positive | 863175 - 863921 | 28097.8 |
| nuclear transport factor 2 family protein | AT705_RS03870 | Not Available | Negative | 864034 - 865083 | 38710.1 |
| arac family transcriptional regulator | AT705_RS03875 | Not Available | Negative | 865225 - 866253 | 39222.5 |
| mbl fold metallo-hydrolase | AT705_RS03880 | Not Available | Negative | 866347 - 867141 | 29230.1 |
| ef-tu/if-2/rf-3 family gtpase | AT705_RS03885 | A8Z5T8 | Negative | 867259 - 867633 | 13059.8 |
| esterase-like activity of phytase family protein | AT705_RS03890 | Not Available | Positive | 867934 - 869004 | 39526.3 |
| gh92 family glycosyl hydrolase | AT705_RS03895 | O86365 | Negative | 869178 - 871673 | 90908.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
