Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mlad family protein | AT705_RS03795 | Not Available | Negative | 850495 - 851532 | 38622.5 |
| atp-binding cassette domain-containing protein | AT705_RS03800 | Q87RS1 | Negative | 851504 - 852202 | 25816.3 |
| abc transporter permease | AT705_RS03805 | Not Available | Negative | 852202 - 852954 | 27384.0 |
| dicarboxylate/amino acid:cation symporter | AT705_RS03810 | O07605 | Positive | 853254 - 854603 | 47487.5 |
| hypothetical protein | AT705_RS03815 | Not Available | Negative | 854733 - 855044 | 11137.6 |
| duf6435 family protein | AT705_RS03820 | Not Available | Negative | 855129 - 855308 | 6982.38 |
| hypothetical protein | AT705_RS03825 | Not Available | Positive | 855582 - 856046 | 17748.6 |
| phosphatidylserine decarboxylase | AT705_RS24815 | F4KAK5 | Positive | 856128 - 856841 | 26369.4 |
| is5 family transposase | AT705_RS03840 | P03009 | Positive | 857201 - 857839 | 23751.3 |
| hypothetical protein | AT705_RS03845 | Not Available | Positive | 857907 - 859754 | 67769.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
