Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AT705_RS03745 | Not Available | Positive | 840977 - 841534 | 21556.0 |
| dcap family trimeric outer membrane transporter | AT705_RS03750 | Not Available | Positive | 841773 - 842903 | 41893.8 |
| abc transporter substrate-binding protein | AT705_RS03755 | Not Available | Positive | 842914 - 843771 | 32052.1 |
| dicarboxylate/amino acid:cation symporter | AT705_RS03760 | P96603 | Positive | 843782 - 845080 | 46686.1 |
| hypothetical protein | AT705_RS03765 | Not Available | Negative | 845130 - 846128 | 38165.8 |
| hypothetical protein | AT705_RS03770 | Not Available | Negative | 846221 - 846883 | 24296.5 |
| hypothetical protein | AT705_RS03775 | Not Available | Negative | 847068 - 848066 | 36306.5 |
| lamin tail domain-containing protein | AT705_RS03780 | Not Available | Negative | 848084 - 848902 | 31050.6 |
| glycoside hydrolase family 19 protein | AT705_RS03785 | P44187 | Negative | 848905 - 849540 | 23806.3 |
| hypothetical protein | AT705_RS03790 | Not Available | Negative | 849696 - 850502 | 30605.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
