Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | AT705_RS00080 | Not Available | Negative | 16133 - 19237 | 114610.0 |
| efflux rnd transporter periplasmic adaptor subunit | AT705_RS00085 | Not Available | Negative | 19234 - 20406 | 42692.6 |
| nicotianamine synthase family protein | AT705_RS00090 | Q9FKT9 | Positive | 20573 - 21394 | 30525.8 |
| mfs transporter | AT705_RS00095 | P9WJX4 | Positive | 21400 - 22665 | 45330.7 |
| hypothetical protein | AT705_RS00100 | Not Available | Positive | 22675 - 23127 | 17330.6 |
| abc transporter atp-binding protein | AT705_RS00105 | P19844 | Positive | 23291 - 24013 | 26273.9 |
| duf3526 domain-containing protein | AT705_RS00110 | Not Available | Positive | 24053 - 25492 | 55213.9 |
| duf3526 domain-containing protein | AT705_RS00115 | Not Available | Positive | 25479 - 26837 | 50944.2 |
| gnat family n-acetyltransferase | AT705_RS00120 | Not Available | Positive | 26983 - 27480 | 18740.5 |
| hypothetical protein | AT705_RS00125 | Not Available | Negative | 27669 - 28805 | 41187.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
