Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | AT705_RS03595 | Q8G2M6 | Positive | 799779 - 802952 | 115141.0 |
| amp-binding protein | AT705_RS03600 | O31826 | Positive | 803250 - 804953 | 63036.8 |
| nad(p)/fad-dependent oxidoreductase | AT705_RS03605 | P63534 | Negative | 805015 - 806436 | 51644.1 |
| hybrid sensor histidine kinase/response regulator | AT705_RS03610 | Not Available | Positive | 806851 - 810939 | 152990.0 |
| fad-binding oxidoreductase | AT705_RS03615 | A5ABH0 | Negative | 811003 - 812724 | 63735.1 |
| adp-ribosylglycohydrolase family protein | AT705_RS25625 | A8GG79 | Negative | 812915 - 813403 | 17653.8 |
| adp-ribosylglycohydrolase family protein | AT705_RS25630 | Not Available | Negative | 813321 - 813812 | 18119.5 |
| duf3291 domain-containing protein | AT705_RS03625 | Not Available | Negative | 813947 - 814417 | 18312.7 |
| serine hydrolase | AT705_RS03630 | Not Available | Negative | 814752 - 815879 | 42088.3 |
| is4 family transposase | AT705_RS03635 | Not Available | Negative | 816159 - 816424 | 9805.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
