Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | AT705_RS03545 | P0AFP5 | Positive | 789460 - 790290 | 30584.8 |
| 50s ribosomal protein l20 | AT705_RS03550 | Q3IL78 | Negative | 790348 - 790707 | 13446.5 |
| 50s ribosomal protein l35 | AT705_RS03555 | Q3IL79 | Negative | 790723 - 790923 | 7727.77 |
| translation initiation factor if-3 | AT705_RS03560 | Q3IL80 | Negative | 791128 - 791691 | 21358.1 |
| threonine--trna ligase | AT705_RS03565 | B4RSL8 | Negative | 791764 - 793674 | 73245.6 |
| endonuclease/exonuclease/phosphatase family protein | AT705_RS03570 | Not Available | Positive | 793912 - 794916 | 38019.1 |
| duf3010 family protein | AT705_RS03575 | Not Available | Positive | 794992 - 795453 | 17350.7 |
| abc transporter atp-binding protein | AT705_RS03580 | Not Available | Positive | 795663 - 797507 | 68176.4 |
| tetr/acrr family transcriptional regulator | AT705_RS03585 | Not Available | Negative | 797524 - 798138 | 22827.4 |
| efflux rnd transporter periplasmic adaptor subunit | AT705_RS03590 | Not Available | Positive | 798599 - 799774 | 42409.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
