Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | AT705_RS03495 | Q8D5Z6 | Positive | 774395 - 776617 | 82611.1 |
| type 1 glutamine amidotransferase domain-containing protein | AT705_RS03500 | O74914 | Negative | 776936 - 777682 | 27211.9 |
| winged helix-turn-helix domain-containing protein | AT705_RS03505 | Not Available | Positive | 777973 - 780051 | 78649.8 |
| efflux rnd transporter periplasmic adaptor subunit | AT705_RS03510 | Not Available | Positive | 780249 - 781520 | 47442.9 |
| abc transporter atp-binding protein | AT705_RS03515 | Not Available | Positive | 781533 - 782249 | 26379.8 |
| abc transporter permease | AT705_RS03520 | Not Available | Positive | 782242 - 784656 | 90208.3 |
| sulp family inorganic anion transporter | AT705_RS03525 | P55189 | Negative | 784704 - 786260 | 55352.9 |
| lrp/asnc family transcriptional regulator | AT705_RS03530 | P0ACJ7 | Negative | 786373 - 786831 | 17308.0 |
| mbl fold metallo-hydrolase | AT705_RS03535 | P75849 | Negative | 786886 - 787527 | 23509.4 |
| m14 family metallopeptidase | AT705_RS03540 | Not Available | Negative | 787528 - 789318 | 67156.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
