Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructosamine kinase family protein | AT705_RS03450 | Q87PM1 | Positive | 767782 - 768636 | 33446.8 |
| cpxcg motif-containing cysteine-rich protein | AT705_RS03455 | Not Available | Positive | 768715 - 768918 | 7759.02 |
| riboflavin synthase | AT705_RS03460 | P45273 | Negative | 769074 - 769715 | 23507.3 |
| mate family efflux transporter | AT705_RS03465 | Q8EES3 | Positive | 769854 - 771209 | 48734.8 |
| duf3080 family protein | AT705_RS03470 | Not Available | Positive | 771181 - 772170 | 36852.1 |
| Trna-val | Not Available | Not Available | Positive | 772297 - 772373 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 772415 - 772491 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 772533 - 772609 | Not Available |
| Trna-pseudo | Not Available | Not Available | Positive | 772884 - 772969 | Not Available |
| extracellular solute-binding protein | AT705_RS03490 | Not Available | Positive | 773227 - 774423 | 44929.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
