Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | AT705_RS03400 | Q8Z6F3 | Positive | 754935 - 756806 | 68650.7 |
| asparaginase | AT705_RS03405 | P0A963 | Positive | 756896 - 757906 | 36844.5 |
| nadp-dependent phosphogluconate dehydrogenase | AT705_RS03410 | Q9CHU6 | Negative | 757975 - 759348 | 49264.9 |
| pyruvate kinase | AT705_RS03415 | P21599 | Positive | 759668 - 761101 | 51041.1 |
| lyttr family dna-binding domain-containing protein | AT705_RS03420 | Q814J1 | Negative | 761171 - 761995 | 30644.0 |
| sensor histidine kinase | AT705_RS03425 | P0AD15 | Negative | 762000 - 763070 | 41359.4 |
| amidohydrolase family protein | AT705_RS03430 | Not Available | Negative | 763235 - 764479 | 44146.6 |
| amidohydrolase | AT705_RS03435 | A0A0F7GG06 | Negative | 764490 - 765872 | 50504.7 |
| duf3718 domain-containing protein | AT705_RS03440 | Not Available | Positive | 766490 - 766849 | 12634.4 |
| hypothetical protein | AT705_RS03445 | Not Available | Negative | 766954 - 767646 | 25315.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
