Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | AT705_RS03350 | Q3ILA5 | Positive | 742335 - 743045 | 25969.2 |
| had family hydrolase | AT705_RS03355 | Q4UVL3 | Positive | 743042 - 743689 | 23313.1 |
| class 1a ribonucleoside-diphosphate reductase subunit alpha | AT705_RS03360 | P43754 | Positive | 744056 - 746341 | 85854.8 |
| class ia ribonucleoside-diphosphate reductase subunit beta | AT705_RS03365 | P37427 | Positive | 746393 - 747523 | 43247.3 |
| class i ribonucleotide reductase maintenance protein yfae | AT705_RS03370 | Not Available | Positive | 747523 - 747795 | 9971.24 |
| yaeq family protein | AT705_RS03375 | Not Available | Negative | 747787 - 748311 | 19734.7 |
| tonb-dependent receptor domain-containing protein | AT705_RS03380 | Q9JZN9 | Positive | 748453 - 750999 | 94326.7 |
| nad(p)h nitroreductase | AT705_RS03385 | Not Available | Negative | 751257 - 751805 | 20449.5 |
| doxx family protein | AT705_RS03390 | Not Available | Negative | 751888 - 752589 | 25752.3 |
| fad-dependent oxidoreductase | AT705_RS03395 | P42593 | Negative | 752732 - 754693 | 71905.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
