Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside deaminase | AT705_RS03295 | P78594 | Negative | 730398 - 730835 | 15799.1 |
| hypothetical protein | AT705_RS03300 | Not Available | Negative | 731129 - 731542 | 15515.5 |
| orotidine-5'-phosphate decarboxylase | AT705_RS03305 | Q3IGA7 | Negative | 731765 - 732475 | 25201.5 |
| lipopolysaccharide assembly protein lapb | AT705_RS03310 | P0AB60 | Negative | 732511 - 733674 | 44395.4 |
| integration host factor subunit beta | AT705_RS03320 | Q3IL99 | Negative | 733950 - 734240 | 10831.9 |
| 30s ribosomal protein s1 | AT705_RS03325 | P0AG69 | Negative | 734299 - 735966 | 61012.5 |
| (d)cmp kinase | AT705_RS03330 | A0KJ92 | Negative | 736061 - 736768 | 25652.9 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | AT705_RS03335 | Q3ILA2 | Negative | 736983 - 738260 | 45627.7 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | AT705_RS03340 | Q3ILA3 | Negative | 738260 - 739342 | 40248.2 |
| dna topoisomerase (atp-hydrolyzing) subunit a | AT705_RS03345 | P37411 | Negative | 739489 - 742152 | 98828.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
