Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | AT705_RS03235 | Q3V2Q8 | Negative | 722982 - 723416 | 16465.7 |
| asparagine--trna ligase | AT705_RS03240 | Q3IGU4 | Positive | 723778 - 725175 | 52372.8 |
| glycoside hydrolase family 18 protein | AT705_RS03245 | Not Available | Negative | 725229 - 726449 | 44969.4 |
| cytochrome p460 family protein | AT705_RS24795 | Not Available | Negative | 726597 - 726848 | 9434.18 |
| is4 family transposase | AT705_RS24800 | Q7DC27 | Positive | 726986 - 727904 | 32804.5 |
| hypothetical protein | AT705_RS03270 | Not Available | Negative | 728043 - 728351 | 11231.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | AT705_RS03275 | P0A9L3 | Negative | 728409 - 729026 | 22496.4 |
| hypothetical protein | AT705_RS03280 | Not Available | Negative | 729194 - 729568 | 13920.2 |
| Trna-ser | Not Available | Not Available | Positive | 729620 - 729710 | Not Available |
| hypothetical protein | AT705_RS03290 | Not Available | Negative | 729842 - 730213 | 14107.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
