Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfa family protein | AT705_RS00030 | Not Available | Positive | 6895 - 7299 | 14536.3 |
| phosphotransferase family protein | AT705_RS00035 | Not Available | Negative | 7328 - 8203 | 32651.3 |
| carboxymuconolactone decarboxylase family protein | AT705_RS00040 | Not Available | Negative | 8219 - 8776 | 20359.2 |
| redoxin domain-containing protein | AT705_RS00045 | Not Available | Negative | 8801 - 9349 | 20286.0 |
| nad(p)h-dependent oxidoreductase | AT705_RS00050 | Not Available | Negative | 9359 - 9940 | 21708.8 |
| helix-turn-helix domain-containing protein | AT705_RS00055 | O32238 | Positive | 10049 - 10408 | 13511.6 |
| 2fe-2s iron-sulfur cluster-binding protein | AT705_RS00060 | O85226 | Positive | 10747 - 11067 | 11848.4 |
| nad(p)/fad-dependent oxidoreductase | AT705_RS00065 | O85227 | Positive | 11060 - 12448 | 50313.1 |
| fad-binding oxidoreductase | AT705_RS00070 | O85228 | Positive | 12454 - 13680 | 44818.7 |
| tonb-dependent siderophore receptor | AT705_RS00075 | A0A0H2ZI93 | Positive | 13874 - 15997 | 78814.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
