Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna translocase ftsk 4tm domain-containing protein | AT705_RS03100 | Q8EER3 | Negative | 695825 - 698494 | 96280.0 |
| leucine-responsive transcriptional regulator lrp | AT705_RS03105 | P37424 | Negative | 698563 - 699042 | 18001.9 |
| alanine dehydrogenase | AT705_RS03110 | E1V931 | Positive | 699181 - 700302 | 39546.0 |
| hdod domain-containing protein | AT705_RS03115 | Not Available | Positive | 700439 - 701275 | 30988.9 |
| methyl-accepting chemotaxis protein | AT705_RS03120 | Q9HW91 | Positive | 701447 - 703321 | 67366.1 |
| pilz domain-containing protein | AT705_RS03125 | Not Available | Positive | 703407 - 704000 | 22376.3 |
| agmatine/peptidylarginine deiminase | AT705_RS03130 | Q87NU5 | Positive | 704055 - 705098 | 38778.9 |
| carbon-nitrogen hydrolase | AT705_RS03135 | Q9XGI9 | Positive | 705104 - 705994 | 33138.1 |
| transcription-repair coupling factor | AT705_RS03140 | P45128 | Positive | 706110 - 709583 | 130425.0 |
| csiv family protein | AT705_RS03145 | Not Available | Positive | 709580 - 710425 | 32376.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
