Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AT705_RS03050 | Not Available | Negative | 685121 - 686329 | 44660.2 |
| atp-binding cassette domain-containing protein | AT705_RS03055 | Not Available | Negative | 686322 - 687107 | 28959.9 |
| duf3025 domain-containing protein | AT705_RS03060 | Not Available | Negative | 687104 - 687925 | 32383.3 |
| m28 family metallopeptidase | AT705_RS03065 | Not Available | Positive | 688108 - 689739 | 59178.5 |
| putative manganese transporter | AT705_RS03070 | Not Available | Positive | 689812 - 690978 | 41121.9 |
| ribosome modulation factor | AT705_RS03075 | F5Z7V5 | Negative | 691451 - 691621 | 6688.97 |
| serine--trna ligase | AT705_RS03080 | Q3IH21 | Negative | 692140 - 693429 | 47582.4 |
| fluoride efflux transporter crcb | AT705_RS03085 | Q3IH20 | Negative | 693441 - 693821 | 13618.7 |
| replication-associated recombination protein a | AT705_RS03090 | P45262 | Negative | 693827 - 695179 | 49683.7 |
| outer membrane lipoprotein chaperone lola | AT705_RS03095 | Q3IH42 | Negative | 695172 - 695825 | 23842.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
