Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit alpha/fixb family protein | AT705_RS03000 | Q9HZP7 | Negative | 675021 - 675947 | 31695.9 |
| electron transfer flavoprotein subunit beta/fixa family protein | AT705_RS03005 | Q9HZP6 | Negative | 675944 - 676696 | 27087.0 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | AT705_RS03010 | Q9HZP5 | Positive | 676872 - 678521 | 60506.7 |
| acyl-coa thioesterase | AT705_RS03015 | Not Available | Positive | 678636 - 679118 | 17601.3 |
| mipa/ompv family protein | AT705_RS03020 | Not Available | Negative | 679147 - 679941 | 28642.1 |
| response regulator | AT705_RS03025 | Not Available | Positive | 680287 - 681048 | 28571.4 |
| hypothetical protein | AT705_RS03030 | Not Available | Negative | 681045 - 681398 | 13196.1 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | AT705_RS03035 | P28634 | Positive | 681549 - 682259 | 26711.9 |
| proline--trna ligase | AT705_RS03040 | Q3IGT7 | Positive | 682418 - 684142 | 63640.3 |
| udp-2,3-diacylglucosamine diphosphatase | AT705_RS03045 | Not Available | Positive | 684272 - 685072 | 30837.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
