Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AT705_RS02950 | Not Available | Negative | 661510 - 661851 | 12659.8 |
| hypothetical protein | AT705_RS02955 | Not Available | Positive | 662473 - 664722 | 83400.5 |
| hypothetical protein | AT705_RS02960 | Not Available | Positive | 665335 - 666642 | 47819.2 |
| peroxiredoxin | AT705_RS02965 | Q69TY4 | Positive | 666799 - 667272 | 16728.3 |
| gnat family n-acetyltransferase | AT705_RS02970 | Not Available | Positive | 667528 - 668112 | 21655.1 |
| transcriptional regulator | AT705_RS02975 | Not Available | Negative | 668173 - 668460 | 10646.0 |
| hypothetical protein | AT705_RS02980 | Not Available | Negative | 668453 - 668659 | 7454.92 |
| pas domain s-box protein | AT705_RS02985 | Not Available | Negative | 669080 - 670207 | 42702.2 |
| metallophosphoesterase | AT705_RS02990 | Not Available | Negative | 670395 - 671603 | 45246.1 |
| tonb-dependent receptor | AT705_RS02995 | Not Available | Negative | 671708 - 674497 | 103900.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
