Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AT705_RS02895 | Not Available | Positive | 651215 - 651781 | 21062.3 |
| polysaccharide biosynthesis c-terminal domain-containing protein | AT705_RS02900 | Not Available | Positive | 651924 - 653165 | 44861.0 |
| glutaredoxin domain-containing protein | AT705_RS02905 | Not Available | Positive | 653285 - 653680 | 15286.7 |
| tetratricopeptide repeat protein | AT705_RS02910 | Not Available | Positive | 653783 - 654838 | 39227.9 |
| hypothetical protein | AT705_RS02915 | Not Available | Negative | 654825 - 655451 | 23545.9 |
| lysr family transcriptional regulator | AT705_RS02920 | Not Available | Positive | 655542 - 656411 | 32050.4 |
| rhodanese-related sulfurtransferase | AT705_RS02930 | Q3IGA3 | Negative | 656849 - 657835 | 37583.6 |
| dead/deah box helicase | AT705_RS02935 | Not Available | Positive | 658073 - 659404 | 49725.2 |
| s1 rna-binding domain-containing protein | AT705_RS02940 | O06747 | Positive | 659407 - 660243 | 31248.9 |
| gnat family n-acetyltransferase | AT705_RS02945 | Not Available | Negative | 660302 - 661153 | 31546.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
