Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AT705_RS02640 | Not Available | Positive | 596805 - 597296 | 17917.5 |
| aaa family atpase | AT705_RS02645 | P96343 | Negative | 597362 - 598606 | 46575.3 |
| mu transposase c-terminal domain-containing protein | AT705_RS02650 | Not Available | Negative | 598606 - 600258 | 62605.2 |
| hypothetical protein | AT705_RS02655 | Not Available | Negative | 600258 - 601169 | 34351.1 |
| hypothetical protein | AT705_RS02660 | Not Available | Negative | 601233 - 601661 | 16213.5 |
| hypothetical protein | AT705_RS02665 | Not Available | Negative | 601697 - 602029 | 11997.3 |
| helix-turn-helix domain-containing protein | AT705_RS02670 | Not Available | Positive | 602171 - 602668 | 18239.1 |
| hypothetical protein | AT705_RS02675 | Not Available | Positive | 602681 - 603202 | 19011.7 |
| atp-binding protein | AT705_RS02680 | Not Available | Positive | 603254 - 605932 | 100364.0 |
| hypothetical protein | AT705_RS02685 | Not Available | Negative | 606534 - 607220 | 26353.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
