Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Predicted baseplate | AT705_RS17845 | Not Available | Positive | 4133777 - 4134520 | 26629.1 |
| paar domain-containing protein | AT705_RS17850 | Not Available | Positive | 4134523 - 4134840 | 10773.7 |
| Baseplate assembly protein | AT705_RS17855 | P51768 | Positive | 4134837 - 4135172 | 11998.5 |
| Contractile tail sheath protein | AT705_RS17860 | Q02TE1 | Positive | 4135286 - 4136446 | 41576.1 |
| Tail tube protein | AT705_RS17865 | Not Available | Positive | 4136446 - 4136955 | 18767.8 |
| Hypothetical protein | AT705_RS17870 | Not Available | Positive | 4137057 - 4137314 | 9862.81 |
| hypothetical protein | AT705_RS00010 | Not Available | Positive | 1326 - 1976 | 24953.9 |
| hypothetical protein | AT705_RS00015 | Not Available | Negative | 2317 - 3288 | 37454.4 |
| lruc domain-containing protein | AT705_RS00020 | Not Available | Positive | 3769 - 5835 | 75032.1 |
| hypothetical protein | AT705_RS00025 | Not Available | Positive | 5845 - 6390 | 19339.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
