Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lon peptidase substrate-binding domain-containing protein | AT705_RS02445 | Not Available | Positive | 566623 - 567186 | 21605.7 |
| sigma-70 family rna polymerase sigma factor | AT705_RS02450 | Q3IYV6 | Positive | 567290 - 567949 | 25446.1 |
| chrr family anti-sigma-e factor | AT705_RS02455 | P40685 | Positive | 567942 - 568592 | 24000.6 |
| nuclear transport factor 2 family protein | AT705_RS02460 | Not Available | Positive | 568853 - 569338 | 18449.9 |
| sdr family nad(p)-dependent oxidoreductase | AT705_RS02465 | O86034 | Positive | 569323 - 570048 | 26786.3 |
| nad(p)/fad-dependent oxidoreductase | AT705_RS02470 | Not Available | Positive | 570045 - 571298 | 47733.8 |
| duf1365 domain-containing protein | AT705_RS02475 | Not Available | Positive | 571298 - 572110 | 31007.5 |
| cyclopropane-fatty-acyl-phospholipid synthase family protein | AT705_RS02480 | O53732 | Positive | 572114 - 573391 | 48621.1 |
| duf2878 domain-containing protein | AT705_RS02485 | Not Available | Positive | 573369 - 573881 | 18723.5 |
| chalcone isomerase family protein | AT705_RS02490 | Not Available | Positive | 573874 - 574461 | 22175.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
