Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6768 family protein | AT705_RS02300 | Not Available | Negative | 540228 - 540584 | 13601.8 |
| rna polymerase sigma factor | AT705_RS02305 | Not Available | Negative | 540581 - 541099 | 19912.7 |
| lysr family transcriptional regulator | AT705_RS02310 | P76250 | Negative | 541163 - 542056 | 32414.0 |
| zinc-dependent alcohol dehydrogenase family protein | AT705_RS02315 | Q6AYT0 | Positive | 542155 - 543141 | 34042.1 |
| n-succinylarginine dihydrolase | AT705_RS02320 | B8CN09 | Positive | 543494 - 544831 | 49252.9 |
| helix-turn-helix transcriptional regulator | AT705_RS02325 | Not Available | Negative | 544843 - 545613 | 29384.4 |
| m23 family metallopeptidase | AT705_RS02330 | Not Available | Positive | 545789 - 546811 | 37969.3 |
| gnat family n-acetyltransferase | AT705_RS02335 | Not Available | Positive | 546918 - 547352 | 16423.8 |
| is4 family transposase | AT705_RS02340 | Not Available | Positive | 547535 - 548347 | 30234.7 |
| hypothetical protein | AT705_RS02345 | Not Available | Positive | 548337 - 548579 | 8670.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
