Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AT705_RS02255 | Not Available | Positive | 530373 - 531311 | 35877.4 |
| endonuclease/exonuclease/phosphatase family protein | AT705_RS02260 | Not Available | Negative | 531579 - 532790 | 44856.4 |
| hypothetical protein | AT705_RS02265 | Not Available | Positive | 532907 - 533347 | 15725.0 |
| alpha/beta fold hydrolase | AT705_RS02270 | Not Available | Negative | 533417 - 534250 | 31170.1 |
| dash family cryptochrome | AT705_RS02275 | Q5QXE0 | Positive | 534408 - 535772 | 52392.1 |
| deoxyribodipyrimidine photo-lyase | AT705_RS02280 | Q9KS67 | Positive | 535769 - 537220 | 55732.0 |
| duf2256 domain-containing protein | AT705_RS24780 | Not Available | Positive | 537224 - 537376 | 6165.45 |
| cryptochrome/photolyase family protein | AT705_RS02285 | A9CH39 | Positive | 537369 - 538931 | 59695.4 |
| flavin reductase family protein | AT705_RS02290 | Not Available | Positive | 538994 - 539644 | 23704.1 |
| hypothetical protein | AT705_RS02295 | Not Available | Positive | 539834 - 540211 | 13149.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
