Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit alpha | AT705_RS02160 | Q3IIL3 | Positive | 505036 - 505335 | 11114.4 |
| eal domain-containing protein | AT705_RS02165 | P76446 | Positive | 505525 - 507087 | 58319.8 |
| alpha-glucosidase family protein | AT705_RS02170 | Q9Z3R8 | Negative | 507149 - 508771 | 61891.0 |
| tonb-dependent receptor | AT705_RS02175 | Not Available | Positive | 509501 - 512356 | 105458.0 |
| tryptophan halogenase family protein | AT705_RS02180 | P95480 | Positive | 512423 - 513931 | 56702.7 |
| alpha-amylase family glycosyl hydrolase | AT705_RS02185 | Not Available | Positive | 513999 - 515954 | 72236.0 |
| mfs transporter | AT705_RS02190 | A2X6E6 | Positive | 515956 - 517446 | 54549.4 |
| glycoside hydrolase family 15 protein | AT705_RS02195 | P29761 | Positive | 517467 - 519860 | 87709.4 |
| duf805 domain-containing protein | AT705_RS02200 | Not Available | Positive | 520235 - 520492 | 9322.41 |
| hypothetical protein | AT705_RS02205 | Not Available | Negative | 520515 - 520889 | 14008.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
