Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter substrate-binding domain-containing protein | AT705_RS02110 | Not Available | Positive | 492660 - 493427 | 29638.7 |
| voc family protein | AT705_RS02115 | Q55595 | Negative | 493505 - 493945 | 16510.7 |
| pre-peptidase c-terminal domain-containing protein | AT705_RS02120 | Not Available | Negative | 494041 - 495999 | 71082.1 |
| duf1566 domain-containing protein | AT705_RS02125 | Not Available | Negative | 496021 - 496701 | 25654.2 |
| ethylbenzene dehydrogenase-related protein | AT705_RS02130 | Not Available | Negative | 496698 - 498113 | 54157.7 |
| ggdef domain-containing protein | AT705_RS02135 | Not Available | Positive | 498378 - 499586 | 45315.6 |
| duf2066 domain-containing protein | AT705_RS02140 | Not Available | Positive | 499698 - 500753 | 40265.1 |
| dnaa inactivator hda | AT705_RS02145 | B4EY85 | Positive | 500755 - 501459 | 26078.4 |
| phenylalanine--trna ligase subunit alpha | AT705_RS02150 | Q12NU0 | Positive | 501652 - 502632 | 36835.9 |
| phenylalanine--trna ligase subunit beta | AT705_RS02155 | Q3IIL2 | Positive | 502646 - 505033 | 86515.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
