Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trar/dksa c4-type zinc finger protein | AT705_RS02070 | Not Available | Positive | 482405 - 482719 | 11842.9 |
| ydch family protein | AT705_RS02075 | Not Available | Positive | 482733 - 482984 | 10025.8 |
| duf4145 domain-containing protein | AT705_RS02080 | Not Available | Positive | 483286 - 483822 | 19391.0 |
| transposase | AT705_RS02085 | Not Available | Positive | 484157 - 485128 | 37401.4 |
| hypothetical protein | AT705_RS02090 | Not Available | Negative | 485377 - 485769 | 14598.5 |
| atp-dependent endonuclease | AT705_RS02095 | Not Available | Negative | 485853 - 487532 | 63065.0 |
| hypothetical protein | AT705_RS26035 | Not Available | Positive | 487899 - 487958 | 2336.83 |
| is4 family transposase | AT705_RS25130 | Not Available | Negative | 488103 - 488243 | 5349.4 |
| hypothetical protein | AT705_RS02100 | Not Available | Positive | 488651 - 488947 | 10827.2 |
| collagenase | AT705_RS02105 | P43154 | Positive | 489792 - 492569 | 100831.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
