Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AT705_RS02020 | Not Available | Negative | 471524 - 472000 | 17675.9 |
| duf6463 family protein | AT705_RS02025 | Not Available | Negative | 472102 - 472491 | 14536.7 |
| tetr/acrr family transcriptional regulator | AT705_RS02030 | Not Available | Negative | 472488 - 473027 | 20215.3 |
| duf2867 domain-containing protein | AT705_RS02035 | Not Available | Negative | 473024 - 473524 | 18670.7 |
| nucleoside-binding protein | AT705_RS02040 | Not Available | Negative | 473688 - 474473 | 29420.2 |
| na+/h+ antiporter nhac family protein | AT705_RS02045 | Not Available | Negative | 474603 - 475916 | 46141.2 |
| 4-hydroxy-tetrahydrodipicolinate reductase | AT705_RS02050 | Q3IKQ7 | Positive | 476370 - 477173 | 28690.2 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | AT705_RS02055 | Q87SF4 | Positive | 477380 - 478516 | 41083.8 |
| carbamoyl-phosphate synthase large subunit | AT705_RS02060 | Q9KPH9 | Positive | 478534 - 481752 | 117619.0 |
| transcription elongation factor grea | AT705_RS02065 | P43881 | Positive | 481798 - 482274 | 17572.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
