Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AT705_RS01975 | Not Available | Positive | 462367 - 463083 | 26484.0 |
| hypothetical protein | AT705_RS01980 | Not Available | Negative | 463181 - 463588 | 14479.1 |
| porin | AT705_RS01985 | Not Available | Negative | 463599 - 464672 | 40308.7 |
| methyl-accepting chemotaxis protein | AT705_RS01990 | Q88IY8 | Negative | 464856 - 466475 | 58719.1 |
| hypothetical protein | AT705_RS01995 | Not Available | Positive | 467066 - 468247 | 43135.8 |
| phosphate abc transporter substrate-binding protein | AT705_RS02000 | Not Available | Positive | 468258 - 468662 | 14217.0 |
| abc transporter substrate-binding protein | AT705_RS02005 | Not Available | Negative | 468751 - 469377 | 23483.4 |
| hypothetical protein | AT705_RS02010 | Not Available | Positive | 469715 - 470077 | 13091.5 |
| atp-binding protein | AT705_RS24770 | Not Available | Positive | 470607 - 470750 | 5251.55 |
| mapeg family protein | AT705_RS02015 | Not Available | Positive | 471098 - 471508 | 14780.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
