Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinone-dependent dihydroorotate dehydrogenase | AT705_RS01925 | Q3IGZ1 | Positive | 443329 - 444339 | 36914.3 |
| cell division protein zapc domain-containing protein | AT705_RS01930 | Q3IGZ2 | Positive | 444583 - 445113 | 20367.4 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | AT705_RS01935 | Q3IGZ3 | Positive | 445225 - 447336 | 80268.1 |
| glutaredoxin family protein | AT705_RS01940 | Not Available | Positive | 447329 - 447559 | 8737.45 |
| abc transporter atp-binding protein | AT705_RS01945 | Q57242 | Positive | 447561 - 449474 | 71544.3 |
| duf3466 family protein | AT705_RS01950 | Not Available | Positive | 449486 - 451207 | 63268.1 |
| glycosyl hydrolase family 18 protein | AT705_RS01955 | P96156 | Positive | 451910 - 455071 | 116631.0 |
| lytic polysaccharide monooxygenase | AT705_RS01960 | Not Available | Positive | 455120 - 456709 | 59013.6 |
| glycosyl hydrolase family 18 protein | AT705_RS01965 | P32823 | Positive | 456729 - 459371 | 96121.4 |
| ig-like domain-containing protein | AT705_RS01970 | Q00971 | Positive | 459460 - 462216 | 101563.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
