Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna chaperone proq | AT705_RS01880 | A1S5Y5 | Positive | 423388 - 424059 | 25562.6 |
| carboxy terminal-processing peptidase | AT705_RS01885 | P43669 | Positive | 424070 - 426106 | 77312.4 |
| na+/h+ antiporter nhac | AT705_RS01890 | P27611 | Positive | 426349 - 427821 | 52030.4 |
| aminopeptidase n | AT705_RS01895 | P04825 | Positive | 428010 - 430601 | 97203.2 |
| duf2835 family protein | AT705_RS24765 | Not Available | Positive | 430689 - 430865 | 6841.36 |
| duf1302 domain-containing protein | AT705_RS01900 | Not Available | Positive | 431102 - 433219 | 77616.3 |
| duf1329 domain-containing protein | AT705_RS01905 | Q9HX91 | Positive | 433231 - 434598 | 51798.4 |
| ycf48-related protein | AT705_RS01910 | Not Available | Positive | 434708 - 435706 | 36015.7 |
| rnd family transporter | AT705_RS01915 | Not Available | Positive | 435706 - 438036 | 84441.2 |
| nad-glutamate dehydrogenase | AT705_RS01920 | Q9HZE0 | Positive | 438239 - 443077 | 181880.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
