Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain SCSIO 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1186942 bp
Thymine Count
1177319 bp
Guanine Count
1087505 bp
Cytosine Count
1081123 bp
Genome Length
4532889 bp
Protein-coding Genes
3763 genes
Non-Coding Genes
183 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | AT705_RS01625 | Not Available | Positive | 371141 - 371908 | 28022.0 |
| sdr family oxidoreductase | AT705_RS01630 | Not Available | Positive | 372180 - 372920 | 27310.7 |
| class i trna ligase family protein | AT705_RS01635 | A6LFP0 | Positive | 372943 - 374991 | 77341.2 |
| glutathione peroxidase | AT705_RS01640 | Not Available | Positive | 375037 - 375519 | 18252.6 |
| duf924 family protein | AT705_RS01645 | Not Available | Positive | 375557 - 376093 | 21108.9 |
| voc family protein | AT705_RS01650 | Not Available | Positive | 376123 - 376512 | 13917.2 |
| gnat family n-acetyltransferase | AT705_RS01655 | O07614 | Positive | 376724 - 377173 | 16873.8 |
| hypothetical protein | AT705_RS01660 | Not Available | Positive | 377841 - 378650 | 30593.9 |
| alpha/beta hydrolase | AT705_RS01665 | Not Available | Positive | 378670 - 379518 | 31998.7 |
| amp-binding protein | AT705_RS01670 | Q70LM5 | Positive | 379481 - 380956 | 54322.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
